{"id":4623,"date":"2018-07-12T19:07:00","date_gmt":"2018-07-12T19:07:00","guid":{"rendered":"https:\/\/www.waters.com\/blog\/the-expanding-role-of-mass-spec-for-peptide-mapping-in-multi-attribute-monitoring-assays\/"},"modified":"2023-07-06T18:31:53","modified_gmt":"2023-07-06T18:31:53","slug":"the-expanding-role-of-mass-spec-for-peptide-mapping-in-multi-attribute-monitoring-assays","status":"publish","type":"post","link":"https:\/\/www.waters.com\/blog\/the-expanding-role-of-mass-spec-for-peptide-mapping-in-multi-attribute-monitoring-assays\/","title":{"rendered":"The Expanding Role of Mass Spec for Peptide Mapping in Multi-Attribute Monitoring Assays"},"content":{"rendered":"<h2>Adopting peptide map MAM assays can bring efficiencies to biotherapeutic monitoring in characterization and late development \u2013 and they can streamline method transfer for global QC deployment<\/h2>\n<p>Biopharmaceutical laboratories are exploring how to use multi-attribute monitoring (MAM) and LC-MS assays to monitor critical quality attributes (CQAs) of biologics during drug development. MAM assays offer the promise detecting and measuring multiple CQAs simultaneously, which can streamline analytical workflows that have previously taken place in parallel, time-consuming processes.<\/p>\n<p>Two MAM approaches for biotherapeutic analysis are commonly being implemented today:<\/p>\n<ul>\n<li>Analysis of monoclonal antibody (mAb) subunit mass<\/li>\n<li>Analysis of peptides from a protein digest\u00a0\u2013 a peptide mapping workflow<\/li>\n<\/ul>\n<p>I&#8217;ve previously discussed the advantages of deploying <a href=\"https:\/\/blog.waters.com\/multi-attribute-monitoring-the-expanding-role-of-mass-spectrometry-for-mab-subunit-analysis\" target=\"_blank\" rel=\"noopener\">subunit protein mass MAM assays<\/a> to achieve higher throughput, to simplify operational processes, and to ensure assay robustness. However, subunit mass MAM assays can be limited in their ability to monitor small mass changes such as deamidations, and they are unable to generate site-specific information when multiple modifications are located on the same subunit fragment.<\/p>\n<p>For these situations, peptide-based analyses are viewed as complementary workflows.<\/p>\n<p>&nbsp;<\/p>\n<p><img decoding=\"async\" class=\"aligncenter size-full wp-image-5482\" src=\"https:\/\/www.waters.com\/blog\/wp-content\/uploads\/feet-arrows-biopharm-625x300-blog.jpg\" alt=\"\" width=\"625\" height=\"300\" \/><\/p>\n<h3><\/h3>\n<h3>Peptide maps are a reliable identity test for QC product release<\/h3>\n<p>High-resolution mass spectrometry and LC-QTof MS peptide mapping methods are indispensable for in-depth protein characterization during biotherapeutics development, whereas optical detection is widely used for peptide mapping identity tests during QC product release. Recently, LC-UV-MS peptide mapping methods have also been developed for product identity release assays, taking advantage of the selectivity and specificity offered by MS detection.<\/p>\n<p>In an article in <em>American Pharmaceutical Review<\/em> that I referenced for <a href=\"https:\/\/www.americanpharmaceuticalreview.com\/Featured-Articles\/190685-Application-of-Electrospray-Ionization-Mass-Spectrometry-in-a-Quality-Control-Laboratory\/\" target=\"_blank\" rel=\"noopener\">subunit MAM analysis<sup>1<\/sup>, Roche researchers<\/a> also shared their success in using a LC-MS peptide mapping identity release assay for pegylated Interferon alpha-2a since 2002.<\/p>\n<p>Recently, researchers in China established a <a href=\"https:\/\/link.springer.com\/article\/10.1007\/s10337-016-3046-8\" target=\"_blank\" rel=\"noopener\">validated identity assay for biotherapeutic mAbs<\/a> using a Waters ACQUITY UPLC-TUV System with an <a href=\"https:\/\/www.waters.com\/waters\/ACQUITY-QDa-Mass-Detector-for-Chromatographic-Analysis\/nav.htm?cid=134761404\" target=\"_blank\" rel=\"noopener\">ACQUITY QDa Detector<\/a>, performed with compliance-ready <a href=\"https:\/\/www.waters.com\/waters\/Empower-3-Chromatography-Data-Software\/nav.htm?cid=513188\">Empower 3 Chromatography Data Software<\/a>.<sup>2<\/sup> In this study, eight complementary domain region (CDR) peptides were monitored and used to establish a signature CDR profile that could uniquely identify each product among 11 monoclonal antibodies (mAbs) produced at that manufacturing site. Looking ahead, the authors foresee this simple, cost-effective, and robust peptide mapping method being deployed as a routine quality control assay.<\/p>\n<h3>Direct quantitative monitoring of multiple product quality attributes<\/h3>\n<p>The key benefit of a peptide mapping MAM approach is that it offers site-specific direct assessment of product quality attributes, and this has received significant interest in the past few years. Here are more examples of its application:<\/p>\n<ul>\n<li>Amgen has been pioneering the deployment of a peptide mapping multi-attribute methodology to streamline biotherapeutics development and QC testing. In a 2015 publication, <a href=\"https:\/\/www.tandfonline.com\/doi\/full\/10.1080\/19420862.2015.1069454\" target=\"_blank\" rel=\"noopener\">Amgen researchers described their efforts to monitor multiple product attributes<\/a> for characterization and process development using high resolution MS1 analysis, and shared their vision of a multi-attribute methodology workflow that can greatly reduce the number of assays needed during process development and quality control.<sup>3<\/sup><\/li>\n<li>Similarly, <a href=\"https:\/\/www.americanpharmaceuticalreview.com\/Featured-Articles\/331529-Multi-Attribute-Monitoring-of-Antibody-Modifications-by-Semi-Automated-Liquid-Chromatography-Mass-Spectrometry-Peptide-Mapping\/\" target=\"_blank\" rel=\"noopener\">Roche Diagnostics published about a peptide MAM approach<\/a> for high-throughput sample preparation along with LC-MS analysis for quantification of deamidation, isomerization, oxidation, and glycosylation.<sup>4<\/sup><\/li>\n<\/ul>\n<p>In both studies, comparable results were obtained using a peptide mapping MAM method when compared to conventional optical detection assays.<\/p>\n<p>However, peptide mapping MAM using the highly complex research-grade mass spectrometers and informatics tools demonstrated in these studies could be quite challenging to deploy by regulated late development and QC laboratories.<\/p>\n<h3>Deploying a QC-friendly peptide mapping MAM platform method<\/h3>\n<p>In a recent internal survey of biopharmaceutical scientists, nearly 70% of respondents indicated that they expected to see a significant increase of MS utilization in regulated development and QC in the future.\u00a0 However, they also see that the biggest challenges for it to be widely adopted lies in overcoming the high costs and complexity of operating and maintaining these advanced tools in regulated laboratory environments, and ensuring consistent, robust performance \u2013 as well as addressing data integrity and compliance.<\/p>\n<p>In a 2017 <em>MAbs<\/em> peer-reviewed article, scientists from <a href=\"https:\/\/www.tandfonline.com\/doi\/full\/10.1080\/19420862.2017.1364326\" target=\"_blank\" rel=\"noopener\">AstraZeneca\/MedImmune shared their success<\/a> in developing and qualifying a QC-friendly MAM method that uses the Waters ACQUITY QDa Mass Detector, according to ICH guideline Q2R1<sup>5<\/sup>, and implementing it to support routine monitoring in downstream process development. In their study, their UPLC-TUV-MS system, operated under Empower 3 Software, provided automated data acquisition, processing, and reporting.<\/p>\n<blockquote><p>In the paper, authors from AstraZeneca\/MedImmune commented, \u201cCompared to traditional high-end mass spectrometers, the [ACQUITY] QDa is cost effective and very easy to operate and maintain.\u201d<\/p><\/blockquote>\n<p><em><a href=\"https:\/\/www.waters.com\/waters\/Mass-Detection-for-Biopharmaceutical-Attribute-Monitoring\/nav.htm?cid=134837932\"><img decoding=\"async\" class=\"size-full wp-image-5481 alignright\" src=\"https:\/\/www.waters.com\/blog\/wp-content\/uploads\/biopharm-mam-qda-250.jpg\" alt=\"\" width=\"250\" height=\"225\" \/><\/a><\/em>Many biopharmaceutical companies are working on developing analytical platform solutions that support routine biopharmaceutical analyses and that can transcend the traditional silos of the discovery, development, and manufacturing\/QC pipeline. As such, fit-for-purpose deployment, ease-of-use, and compliance are all factors that need to be considered early on when adopting multi-attribute monitoring methods.<\/p>\n<p>Those are each important attributes that Waters considers in developing analytical technologies, such as mini LC-MS systems, that can be used to efficiently monitor peptides whether you&#8217;re working in biologic development or QC.<\/p>\n<p><em>The final post in this series will discuss the opportunities for MS in regulated laboratories that want to use MAM assays.<\/em><\/p>\n<p>&nbsp;<\/p>\n<table style=\"height: 136px;\" border=\"0\" width=\"598\" cellspacing=\"0\" cellpadding=\"0\" align=\"center\">\n<tbody>\n<tr>\n<td align=\"center\" valign=\"top\" width=\"600\">\n<table border=\"0\" width=\"100%\" cellspacing=\"0\" cellpadding=\"0\" align=\"center\"><!--\/\/ TEXT ROW --><\/table>\n<p>Do you want to receive updates and info on MAM directly in your inbox?<br \/>\n<!-- \/\/ CENTER BUTTON --><\/p>\n<table class=\"button-container\" border=\"0\" width=\"100%\" cellspacing=\"0\" cellpadding=\"0\" align=\"center\">\n<tbody>\n<tr>\n<td align=\"center\">\n<table class=\"button\" style=\"height: 56px;\" border=\"0\" width=\"153\" cellspacing=\"0\" cellpadding=\"0\">\n<tbody>\n<tr>\n<td align=\"center\" bgcolor=\"#119988\"><span style=\"color: #ffffff;\"><strong><a style=\"color: #ffffff;\" href=\"https:\/\/pages.waters.com\/Multi-Attribute-Monitoring-Updates-Sign-Up.html\">Subscribe now<\/a><\/strong><\/span><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p><!-- CENTER BUTTON \/\/ --><\/p>\n<div>\n<p><!-- TEXT ROW \/\/ --><\/p>\n<\/div>\n<p><!-- [if (gte mso 9)|(lte ie 8)]&gt;--><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>&nbsp;<\/p>\n<h4>Check out my other posts on biopharma labs using MAM methods:<\/h4>\n<ul>\n<li><a href=\"https:\/\/blog.waters.com\/from-characterization-to-late-development-manufacturing-and-qc-the-expanding-role-of-mass-spectrometry-in-biotherapeutics\" target=\"_blank\" rel=\"noopener\">From Characterization to Late Development, Manufacturing, and QC: The Expanding Role of Mass Spectrometry in Biotherapeutics<\/a><\/li>\n<li><a href=\"https:\/\/blog.waters.com\/multi-attribute-monitoring-the-expanding-role-of-mass-spectrometry-for-mab-subunit-analysis\">Multi-Attribute Monitoring: The Expanding Role of Mass Spectrometry for mAb Subunit Analysis<\/a><\/li>\n<\/ul>\n<h4>References:<\/h4>\n<ol>\n<li>Haberger et. al. <a href=\"https:\/\/www.americanpharmaceuticalreview.com\/Featured-Articles\/190685-Application-of-Electrospray-Ionization-Mass-Spectrometry-in-a-Quality-Control-Laboratory\/\">Application of Electrospray Ionization Mass Spectrometry in a Quality Control Laboratory.<\/a><em>\u00a0 Am Pharm Review.<\/em> 2016, 19(5).<\/li>\n<li>Zhang et al. <a href=\"https:\/\/link.springer.com\/article\/10.1007\/s10337-016-3046-8\">Development and Validation of a Peptide Mapping Method for the Characterization of Adalimumab with QDa Detector.<\/a> <em>Chromatographia<\/em> 2016, 79(7), 395-403.<\/li>\n<li><a href=\"https:\/\/www.tandfonline.com\/doi\/full\/10.1080\/19420862.2015.1069454\">Rogers et al. Development of a quantitative mass spectrometry multi-attribute method for characterization, quality control testing and disposition of biologics.<\/a> <em>MAbs<\/em>. 2015, 7(5),881-90.<\/li>\n<li>Bomans et al. <a href=\"https:\/\/www.americanpharmaceuticalreview.com\/Featured-Articles\/331529-Multi-Attribute-Monitoring-of-Antibody-Modifications-by-Semi-Automated-Liquid-Chromatography-Mass-Spectrometry-Peptide-Mapping\/\">Multi-attribute monitoring of antibody modifications by semi-automated liquid chromatography mass spectrometry peptide mapping.<\/a> <em>American Pharm. Review<\/em>, 2016, 16-21.<\/li>\n<li>Xu et al. <a href=\"https:\/\/www.tandfonline.com\/doi\/full\/10.1080\/19420862.2017.1364326\">A Quadrupole Dalton-based multi-attribute method for product characterization, process development, and quality control of therapeutic proteins.<\/a> <em>MAbs<\/em>. 2017, 9(7),1186-1196.<\/li>\n<\/ol>\n<h4>Additional resources:<\/h4>\n<ol>\n<li>Play back our on-demand webinar to hear from Waters biopharmaceutical scientists Jing Fang and Robert Birdsall: <a href=\"https:\/\/www.waters.com\/waters\/library.htm?cid=511436&amp;lid=134916414&amp;locale=101\">\u201cMonitoring Product and Process Attributes in Biopharmaceutical Development and QC.\u201d<\/a><\/li>\n<li>Read application notes about how to use mini LC-MS and mass detection with the <a href=\"https:\/\/www.waters.com\/waters\/Mass-Detection-for-Biopharmaceutical-Attribute-Monitoring\/nav.htm?cid=134837932\">ACQUITY QDa Detector for monitoring peptides and glycans.<\/a><\/li>\n<\/ol>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>There are two primary multi-attribute monitoring (MAM) assay choices for biologic development and QC: subunit protein mass analysis and peptide mapping by LC-MS. Here we explore how peptide mapping LC-MS MAM workflows are being used.<\/p>\n","protected":false},"author":139,"featured_media":1608,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"_seopress_robots_primary_cat":"","_seopress_titles_title":"Expanding Role of Mass Spec in Multi-Attribute Monitoring Assays | Waters Blog","_seopress_titles_desc":"Peptide map MAM assays can bring efficiencies to biotherapeutic monitoring in late development \u2013 and they can streamline method transfer in global QC deployment.","_seopress_robots_index":"","_seopress_analysis_target_kw":"","_kad_blocks_custom_css":"","_kad_blocks_head_custom_js":"","_kad_blocks_body_custom_js":"","_kad_blocks_footer_custom_js":"","_kad_post_transparent":"","_kad_post_title":"","_kad_post_layout":"","_kad_post_sidebar_id":"","_kad_post_content_style":"","_kad_post_vertical_padding":"","_kad_post_feature":"","_kad_post_feature_position":"","_kad_post_header":false,"_kad_post_footer":false,"_kad_post_classname":"","footnotes":""},"categories":[25],"tags":[126,171,51,52,172,173,179,49,151,24,146],"class_list":["post-4623","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-pharmaceutical","tag-acquity-qda","tag-biologics","tag-biopharma","tag-biopharmaceutical","tag-biosimilars","tag-biotherapeutics","tag-characterization","tag-empower-software","tag-mass-detection","tag-mass-spectrometry-ms","tag-multiple-attribute-monitoring-mam"],"acf":[],"taxonomy_info":{"category":[{"value":25,"label":"Pharmaceutical"}],"post_tag":[{"value":126,"label":"ACQUITY QDa"},{"value":171,"label":"biologics"},{"value":51,"label":"biopharma"},{"value":52,"label":"biopharmaceutical"},{"value":172,"label":"biosimilars"},{"value":173,"label":"biotherapeutics"},{"value":179,"label":"characterization"},{"value":49,"label":"Empower Software"},{"value":151,"label":"mass detection"},{"value":24,"label":"mass spectrometry (MS)"},{"value":146,"label":"multiple attribute monitoring (MAM)"}]},"featured_image_src_large":["https:\/\/www.waters.com\/blog\/wp-content\/uploads\/feet-arrows-biopharm-625x300-blog.jpg",625,300,false],"author_info":{"display_name":"Waters Staff","author_link":"https:\/\/www.waters.com\/blog\/author\/waters_staff\/"},"comment_info":"","category_info":[{"term_id":25,"name":"Pharmaceutical","slug":"pharmaceutical","term_group":0,"term_taxonomy_id":25,"taxonomy":"category","description":"We bring high-value technologies designed to solve critical, analytical problems. 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